PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4QTH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-9*01	93.2	Mo_IGHV1-9*01	84.6	H1	13	H1-13-1	8	KAAGYTFTAYWIE	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-9*01	93.2	Mo_IGHV1-9*01	90.0	H2	10	H2-10-*	-1	EILPGSSSTN	BBBBbBABBB
A	heavy	Mus.musculus	Mo_IGHV1-9*01	93.2	Mo_IGHV1-9*01	50.0	H3	15	H3-15-*	-1	TRDFSGdRSNLYFDV
A	heavy	Mus.musculus	Mo_IGHV1-9*01	93.2	Mo_IGHV1-9*01	87.5	H4	8	H4-8-1	8	ADTSSNSA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L1	11	L1-11-1	8	RASQDIGSSLN	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L2	8	L2-8-1	9	YATSSLDS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	85.7	L3	9	L3-9-cis7-1	9	LQYATSPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L4	6	L4-6-2	11	RSGSDY	BBEABB
H	heavy	Mus.musculus	Mo_IGHV1-9*01	93.2	Mo_IGHV1-9*01	84.6	H1	13	H1-13-1	9	KAAGYTFTAYWIE	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-9*01	93.2	Mo_IGHV1-9*01	90.0	H2	10	H2-10-*	-1	EILPGSSSTN	BBBBbBABBB
H	heavy	Mus.musculus	Mo_IGHV1-9*01	93.2	Mo_IGHV1-9*01	50.0	H3	15	H3-15-*	-1	TRDFSGdRSNLYFDV
H	heavy	Mus.musculus	Mo_IGHV1-9*01	93.2	Mo_IGHV1-9*01	87.5	H4	8	H4-8-1	9	ADTSSNSA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L1	11	L1-11-1	12	RASQDIGSSLN	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L2	8	L2-8-1	6	YATSSLDS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	85.7	L3	9	L3-9-cis7-1	13	LQYATSPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L4	6	L4-6-2	12	RSGSDY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022