PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4QHN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-59*11	82.2	Hu_IGHV4-59*11	69.2	H1	13	H1-13-4	19	TVSGGSMGGTYWS	BBBLEBABLBBBB
A	heavy	Homo.sapiens	Hu_IGHV4-59*11	82.2	Hu_IGHV4-59*11	55.6	H2	9	H2-9-1	13	YIFHTGHTN	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV4-59*11	82.2	Hu_IGHV4-59*11	50.0	H3	15	H3-15-*	-1	ASLPRgQLVNAYFRN
A	heavy	Homo.sapiens	Hu_IGHV4-59*11	82.2	Hu_IGHV4-59*11	75.0	H4	8	H4-8-*	-1	VDTSEDQF	BBAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	85.1	Hu_IGLV3-1*01	54.5	L1	11	L1-11-*	-1	SGDKVASKNVC	ABAALaLEBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	85.1	Hu_IGLV3-1*01	62.5	L2	8	L2-8-4	26	YENYKRPS	BEAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	85.1	Hu_IGLV3-1*01	50.0	L3	10	L3-10-3	13	QVWDSFSTFV	BBBBAAAEBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	85.1	Hu_IGLV3-1*01	66.7	L4	6	L4-6-*	-1	KSGSTA	BAbbBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022