PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4QF1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H1	13	H1-13-1	8	AASGFTFDDYAMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H2	10	H2-10-2	9	GISWNSGSIG	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H3	13	H3-13-*	-1	AKDSPRGELPFDY	BBBBBLLABBLAB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	6	RDNAKNSL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-10*01	100.0	Hu_IGLV3-10*01	100.0	L1	11	L1-11-4	8	SGDALPKKYAY	BBAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-10*01	100.0	Hu_IGLV3-10*01	100.0	L2	8	L2-8-1	8	YEDSKRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-10*01	100.0	Hu_IGLV3-10*01	100.0	L3	11	L3-11-2	9	YSTDSSGNHRV	BBBBAALABBB
B	lambda	Homo.sapiens	Hu_IGLV3-10*01	100.0	Hu_IGLV3-10*01	100.0	L4	6	L4-6-2	9	SSGTMA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H1	13	H1-13-1	10	AASGFTFDDYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H2	10	H2-10-2	8	GISWNSGSIG	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H3	13	H3-13-*	-1	AKDSPRGELPFDY	BBBBBLLABBLAB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	100.0	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	6	RDNAKNSL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	100.0	Hu_IGLV3-10*01	100.0	L1	11	L1-11-4	7	SGDALPKKYAY	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	100.0	Hu_IGLV3-10*01	100.0	L2	8	L2-8-1	8	YEDSKRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	100.0	Hu_IGLV3-10*01	100.0	L3	11	L3-11-2	11	YSTDSSGNHRV	BBBBAALABBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	100.0	Hu_IGLV3-10*01	100.0	L4	6	L4-6-2	9	SSGTMA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022