PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4Q6I

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	93.3	L1	15	L1-15-*	-1	RASQSVStsrySYMH	BBABBABBEABBBBB
A	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L2	8	L2-8-1	10	KYASNLES	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L3	9	L3-9-cis7-1	24	QHSWEIPYT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H1	13	H1-13-1	21	KASGYTFTDYSMH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	70.0	H2	10	H2-10-1	19	RINTETGEAK	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H3	13	H3-13-*	-1	ARYDGYSWDAMDY	BBBBAABABBBAB
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H4	8	H4-8-1	18	LETSASTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	93.3	L1	15	L1-15-*	-1	RASQSVStsrySYMH	BBABBABBEABBBBB
D	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L2	8	L2-8-1	10	KYASNLES	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L3	9	L3-9-cis7-1	24	QHSWEIPYT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H1	13	H1-13-1	21	KASGYTFTDYSMH	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	70.0	H2	10	H2-10-1	19	RINTETGEAK	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H3	13	H3-13-*	-1	ARYDGYSWDAMDY	BBBBAABABBBAB
E	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H4	8	H4-8-1	18	LETSASTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	93.3	L1	15	L1-15-*	-1	RASQSVStsrySYMH	BBABBABBEABBBBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L2	8	L2-8-1	10	KYASNLES	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L3	9	L3-9-cis7-1	24	QHSWEIPYT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
G	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H1	13	H1-13-1	21	KASGYTFTDYSMH	BBBLBBAAABBBB
G	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	70.0	H2	10	H2-10-1	19	RINTETGEAK	BBBAAALBBB
G	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H3	13	H3-13-*	-1	ARYDGYSWDAMDY	BBBBAABABBBAB
G	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H4	8	H4-8-1	18	LETSASTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H1	13	H1-13-1	21	KASGYTFTDYSMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	70.0	H2	10	H2-10-1	19	RINTETGEAK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H3	13	H3-13-*	-1	ARYDGYSWDAMDY	BBBBAABABBBAB
H	heavy	Mus.musculus	Mo_IGHV9-2-1*01	89.0	Mo_IGHV9-2-1*01	100.0	H4	8	H4-8-1	18	LETSASTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	93.3	L1	15	L1-15-*	-1	RASQSVStsrySYMH	BBABBABBEABBBBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L2	8	L2-8-1	10	KYASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L3	9	L3-9-cis7-1	24	QHSWEIPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	89.9	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022