PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4Q2Z

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Macaca.mulatta	Ma_IGHV1-1*01	84.9	Ma_IGHV1-1*01	92.3	H1	13	H1-13-1	8	KASGYTFTDYYMH	BBBLBBAAABBBB
A	heavy	Macaca.mulatta	Ma_IGHV1-1*01	84.9	Ma_IGHV1-1*01	30.0	H2	10	H2-10-1	8	QINPKTGGTN	BBBAAALBBB
A	heavy	Macaca.mulatta	Ma_IGHV1-1*01	84.9	Ma_IGHV1-1*01	50.0	H3	17	H3-17-*	-1	ARGGQRlllLRNYYFYY
A	heavy	Macaca.mulatta	Ma_IGHV1-1*01	84.9	Ma_IGHV1-1*01	75.0	H4	8	H4-8-1	16	RDTSTSTA	BBAAALBB
B	lambda	Macaca.mulatta	Ma_IGLV1S1*01	91.2	CDRLenMismatch	-1.0	L1	13	L1-13-1	21	TGSSSNIGGYDVH	BBBAAAAAABBBB
B	lambda	Macaca.mulatta	Ma_IGLV1S1*01	91.2	Ma_IGLV1S1*01	75.0	L2	8	L2-8-1	11	YDNNERPS	BLLABBBB
B	lambda	Macaca.mulatta	Ma_IGLV1S1*01	91.2	Ma_IGLV1S1*01	88.9	L3	11	L3-11-1	12	QSYDSSLNAWV	BBBBAAALBBB
B	lambda	Macaca.mulatta	Ma_IGLV1S1*01	91.2	Ma_IGLV1S1*01	83.3	L4	6	L4-6-2	12	KSATSA	BBEABB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	84.9	Ma_IGHV1-1*01	92.3	H1	13	H1-13-1	7	KASGYTFTDYYMH	BBBLBBAAABBBB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	84.9	Ma_IGHV1-1*01	30.0	H2	10	H2-10-1	10	QINPKTGGTN	BBBAAALBBB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	84.9	Ma_IGHV1-1*01	50.0	H3	17	H3-17-*	-1	ARGGQRlllLRNYYFYY
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	84.9	Ma_IGHV1-1*01	75.0	H4	8	H4-8-1	5	RDTSTSTA	BBAAALBB
L	lambda	Macaca.mulatta	Ma_IGLV1S1*01	91.2	CDRLenMismatch	-1.0	L1	13	L1-13-1	4	TGSSSNIGGYDVH	BBBAAAAAABBBB
L	lambda	Macaca.mulatta	Ma_IGLV1S1*01	91.2	Ma_IGLV1S1*01	75.0	L2	8	L2-8-1	9	YDNNERPS	BLLABBBB
L	lambda	Macaca.mulatta	Ma_IGLV1S1*01	91.2	Ma_IGLV1S1*01	88.9	L3	11	L3-11-1	13	QSYDSSLNAWV	BBBBAAALBBB
L	lambda	Macaca.mulatta	Ma_IGLV1S1*01	91.2	Ma_IGLV1S1*01	83.3	L4	6	L4-6-2	17	KSATSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022