PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4PB9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S135*01	93.2	Mo_IGHV1S135*01	100.0	H1	13	H1-13-1	10	KASGYSFTDYNMY	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	93.2	Mo_IGHV1S135*01	80.0	H2	10	H2-10-1	16	YIDPYNGDAS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	93.2	Mo_IGHV1S135*01	100.0	H3	15	H3-15-*	-1	ARTGYYYgRSYAMDY
H	heavy	Mus.musculus	Mo_IGHV1S135*01	93.2	Mo_IGHV1S135*01	100.0	H4	8	H4-8-1	9	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L1	16	L1-16-1	8	RSSKSLlhsngNTYLY	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L2	8	L2-8-1	10	YRMSNLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L3	9	L3-9-cis7-1	6	MQHLEYPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L4	6	L4-6-3	13	GSGTAF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022