PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4PB0

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV6-6*02	97.3	Mo_IGHV6-6*02	84.6	H1	13	H1-13-1	7	VASGFTFSIFWMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV6-6*02	97.3	Mo_IGHV6-6*02	91.7	H2	12	H2-12-1	11	EVRlkSNNYATH	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV6-6*02	97.3	Mo_IGHV6-6*02	100.0	H3	12	H3-12-*	-1	TRGYYGSNYGEY	BBEBAABBLAAB
H	heavy	Mus.musculus	Mo_IGHV6-6*02	97.3	Mo_IGHV6-6*02	87.5	H4	8	H4-8-1	6	RDDSKSGV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	93.8	L1	16	L1-16-1	5	KSSQSLldsdgGTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100.0	L2	8	L2-8-1	4	YLVSKLDS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	85.7	L3	9	L3-9-cis7-1	8	WQGAHFPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022