PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4P48

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	92.3	H1	13	H1-13-1	8	KASGFTFSSYGMQ	BBBLBBAAABBBB
A	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	40.0	H2	10	H2-10-*	-1	GIQNDDTGTY	BBBAALBLBB
A	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	60.0	H3	17	H3-17-*	-1	AKDASSDGgygGDSIDA
A	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	100.0	H4	8	H4-8-1	5	RDNGQSTV	BBAAALBB
A	lambda	Gallus.gallus	Ch_IGLV1S1*01	93.9	CDRLenMismatch	-1.0	L1	14	L1-14-*	-1	SGGGRyYDGSYYYG	BLBBBBAALBBBBB
A	lambda	Gallus.gallus	Ch_IGLV1S1*01	93.9	Ch_IGLV1S1*01	75.0	L2	8	L2-8-*	-1	YENTKRPS	BLLABBBA
A	lambda	Gallus.gallus	Ch_IGLV1S1*01	93.9	Ch_IGLV1S1*01	22.2	L3	11	L3-11-*	-1	GSADDNMNPTI	BBBABAABABB
A	lambda	Gallus.gallus	Ch_IGLV1S1*01	93.9	Ch_IGLV1S1*01	100.0	L4	6	L4-6-2	6	KSGSTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022