PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4OQT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	76.9	H1	13	H1-13-4	14	AASGFTFSAYEMK	BBBLBBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H2	10	H2-10-2	12	VIGPSGGFTF	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H3	11	H3-11-*	-1	ATEGDNDAFDI	BBBBABAABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	8	RASQSVSSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	13	YDASNRAT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	100.0	L3	10	L3-10-cis78-*	-1	QQRSNWPmYT	BBAABBaBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022