PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4ONF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-6*03	90.4	Mo_IGHV5-6*03	92.3	H1	13	H1-13-1	9	AASGFTFSNYGMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-6*03	90.4	Mo_IGHV5-6*03	60.0	H2	10	H2-10-6	11	SIRSGGGRTY	BBBABLLBBB
H	heavy	Mus.musculus	Mo_IGHV5-6*03	90.4	Mo_IGHV5-6*03	33.3	H3	12	H3-12-1	18	VRYDHYSGSSDY	BBBBAAALBBAB
H	heavy	Mus.musculus	Mo_IGHV5-6*03	90.4	Mo_IGHV5-6*03	87.5	H4	8	H4-8-1	5	RENAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	97.1	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	4	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	97.1	Mo_IGKV1-135*01	100.0	L2	8	L2-8-*	-1	YLVSKLDS	BLLABBBA
L	kappa	Mus.musculus	Mo_IGKV1-135*01	97.1	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	11	WQGTHFPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	97.1	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022