PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4OII

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S122*01	98.4	Mo_IGHV1S122*01	100.0	H1	13	H1-13-1	12	KASGYTFTSYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S122*01	98.4	Mo_IGHV1S122*01	60.0	H2	10	H2-10-1	10	DINPNNGGPS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S122*01	98.4	Mo_IGHV1S122*01	0.0	H3	10	H3-10-*	-1	TIDDGYRFGY	BBBALLBBAB
H	heavy	Mus.musculus	Mo_IGHV1S122*01	98.4	Mo_IGHV1S122*01	87.5	H4	8	H4-8-1	6	VDTSSSTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1S122*01	98.4	Mo_IGHV1S122*01	100.0	H1	13	H1-13-1	12	KASGYTFTSYWMH	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1S122*01	98.4	Mo_IGHV1S122*01	60.0	H2	10	H2-10-1	10	DINPNNGGPS	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1S122*01	98.4	Mo_IGHV1S122*01	0.0	H3	10	H3-10-*	-1	TIDDGYRFGY	BBBALLBBAB
I	heavy	Mus.musculus	Mo_IGHV1S122*01	98.4	Mo_IGHV1S122*01	87.5	H4	8	H4-8-1	6	VDTSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	98.6	Mo_IGKV12-41*01	100.0	L1	11	L1-11-2	4	RASGNIHNYLA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	98.6	Mo_IGKV12-41*01	100.0	L2	8	L2-8-1	9	YNAKTLAD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	98.6	Mo_IGKV12-41*01	100.0	L3	9	L3-9-cis7-1	12	QHFWSTPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	98.6	Mo_IGKV12-41*01	100.0	L4	6	L4-6-1	8	GSGTQY	EBEABB
M	kappa	Mus.musculus	Mo_IGKV12-41*01	98.6	Mo_IGKV12-41*01	100.0	L1	11	L1-11-2	4	RASGNIHNYLA	BBABBALLBBB
M	kappa	Mus.musculus	Mo_IGKV12-41*01	98.6	Mo_IGKV12-41*01	100.0	L2	8	L2-8-1	9	YNAKTLAD	BLLABBBB
M	kappa	Mus.musculus	Mo_IGKV12-41*01	98.6	Mo_IGKV12-41*01	100.0	L3	9	L3-9-cis7-1	12	QHFWSTPRT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV12-41*01	98.6	Mo_IGKV12-41*01	100.0	L4	6	L4-6-1	8	GSGTQY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022