PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4ODW

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV5-6-2*01	95.9	Mo_IGHV5-6-2*01	100.0	H1	13	H1-13-1	15	AASGFTFSSYYMS	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV5-6-2*01	95.9	Mo_IGHV5-6-2*01	90.0	H2	10	H2-10-2	15	AINSNGGNTY	BBBAALABBB
A	heavy	Mus.musculus	Mo_IGHV5-6-2*01	95.9	Mo_IGHV5-6-2*01	50.0	H3	15	H3-15-*	-1	TRLYGnYVRIHTMDY
A	heavy	Mus.musculus	Mo_IGHV5-6-2*01	95.9	Mo_IGHV5-6-2*01	100.0	H4	8	H4-8-1	4	RDNAKNTL	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV10-96*02	91.3	Mo_IGKV10-96*02	81.8	L1	11	L1-11-*	-1	RASQDIRNYLS	BBABBBBLBBB
B	kappa	Mus.musculus	Mo_IGKV10-96*02	91.3	Mo_IGKV10-96*02	87.5	L2	8	L2-8-1	12	YYTSKLHS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV10-96*02	91.3	Mo_IGKV10-96*02	85.7	L3	10	L3-10-*	-1	QQGKTLPlYT	BBBABBaABB
B	kappa	Mus.musculus	Mo_IGKV10-96*02	91.3	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	14	GSGTDY	EBEABB
H	heavy	Mus.musculus	Mo_IGHV5-6-2*01	95.9	Mo_IGHV5-6-2*01	100.0	H1	13	H1-13-1	14	AASGFTFSSYYMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-2*01	95.9	Mo_IGHV5-6-2*01	90.0	H2	10	H2-10-2	15	AINSNGGNTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-6-2*01	95.9	Mo_IGHV5-6-2*01	50.0	H3	15	H3-15-*	-1	TRLYGnYVRIHTMDY
H	heavy	Mus.musculus	Mo_IGHV5-6-2*01	95.9	Mo_IGHV5-6-2*01	100.0	H4	8	H4-8-1	4	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	91.3	Mo_IGKV10-96*02	81.8	L1	11	L1-11-2	11	RASQDIRNYLS	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	91.3	Mo_IGKV10-96*02	87.5	L2	8	L2-8-1	12	YYTSKLHS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	91.3	Mo_IGKV10-96*02	85.7	L3	10	L3-10-*	-1	QQGKTLPlYT	BBBABBaABB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	91.3	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	14	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022