PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4OD2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	90.9	L1	11	L1-11-*	-1	SGDSLRSYYAS	BBAAAAABBBE
A	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	87.5	L2	8	L2-8-*	-1	YGANNRPS	BEEBBBBB
A	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	88.9	L3	11	L3-11-*	-1	NSADSSGNHVV	BBBBAALABBB
A	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	14	SSGNTA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-20*04	94.5	Hu_IGHV3-20*04	92.3	H1	13	H1-13-1	16	AASGFTFDDYAMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-20*04	94.5	Hu_IGHV3-20*04	90.0	H2	10	H2-10-2	21	GINWQGGSTG	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-20*04	94.5	Hu_IGHV3-20*04	50.0	H3	14	H3-14-*	-1	AKILGAGRGWYFDY	BBBABABBBABBAB
B	heavy	Homo.sapiens	Hu_IGHV3-20*04	94.5	Hu_IGHV3-20*04	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022