PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4O4Y

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGHV1S69*01	92.8	Rb_IGHV1S69*01	84.6	H1	13	H1-13-1	9	TVSGFSLSSYPMN	BBBLBBAAABBBB
H	heavy	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGHV1S69*01	92.8	Rb_IGHV1S69*01	33.3	H2	9	H2-9-1	16	GIGTSGNIW	BBBAALBBB
H	heavy	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGHV1S69*01	92.8	Rb_IGHV1S69*01	100.0	H3	10	H3-10-*	-1	ARGLYNDYTV	BBEAABAABB
H	heavy	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGHV1S69*01	92.8	Rb_IGHV1S69*01	0.0	H4	7	H4-7-1	8	RASSTTV	BABAABB
L	kappa	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGKV1S45*01	88.1	Rb_IGKV1S45*01	92.3	L1	13	L1-13-3	5	QASQSVynKNYLA	BBABBBBLLABBB
L	kappa	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGKV1S45*01	88.1	Rb_IGKV1S45*01	100.0	L2	8	L2-8-1	6	YSASTLAS	BLLABBBB
L	kappa	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGKV1S45*01	88.1	Rb_IGKV1S45*01	28.6	L3	13	L3-13-2	7	LGSYDCNraecHA	BBBBBAAABBABB
L	kappa	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGKV1S45*01	88.1	Rb_IGKV1S45*01	100.0	L4	6	L4-6-1	7	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022