PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4NRZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	69.2	H1	13	H1-13-1	10	KVSGYNFASEWIG	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	10	IIYPGDSDTK	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	100.0	H3	23	H3-23-*	-1	ARQNHYgsgsyfyrtAYYYAMDV
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	10	ADKSINTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	72.7	L1	11	L1-11-1	9	RASQHIKKYLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	62.5	L2	8	L2-8-1	7	YGALNLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	20	QQSYSTPFT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	69.2	H1	13	H1-13-1	10	KVSGYNFASEWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	9	IIYPGDSDTK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	100.0	H3	23	H3-23-*	-1	ARQNHYgsgsyfyrtAYYYAMDV
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	94.5	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	11	ADKSINTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	72.7	L1	11	L1-11-1	7	RASQHIKKYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	62.5	L2	8	L2-8-1	8	YGALNLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	20	QQSYSTPFT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022