PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4NP4

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H1	13	H1-13-1	7	KGSGYSFTSYWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	80.0	H2	10	H2-10-1	9	IFYPGDSSTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H3	12	H3-12-*	-1	ARRRNWGNAFDI	BBBBAEbLBBAB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	75.0	H4	8	H4-8-*	-1	ADKSVNTA	BBALALBB
I	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H1	13	H1-13-1	6	KGSGYSFTSYWIG	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	80.0	H2	10	H2-10-1	18	IFYPGDSSTR	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H3	12	H3-12-*	-1	ARRRNWGNAFDI	BBBBAEbLBBAB
I	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	75.0	H4	8	H4-8-*	-1	ADKSVNTA	BALEBaBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	11	RASQSVSsSYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	8	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-*	-1	QQYGSSTWT	BBBlLLeBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	10	RASQSVSsSYLA	BBABBBBAAABB
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	8	YGASSRAT	BLLABBBB
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-1	13	QQYGSSTWT	BBBELLBBB
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022