PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4NKI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	84.6	H1	13	H1-13-1	11	AASGFTFSSYIMM	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	50.0	H2	10	H2-10-2	9	SIYPSGGITF	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	50.0	H3	13	H3-13-*	-1	ARIKLGTVTTVDY	BBBBBLBAABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	7	TGTSSDVGgYNYVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	87.5	L2	8	L2-8-1	7	YDVSNRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	88.9	L3	10	L3-10-1	17	SSYTSSSTRV	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	100.0	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	4	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022