PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4NC1

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-1	18	AASGRTFSMDPMA	BBBLBBAAABBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	CDRLenMismatch	-1.0	H2	10	H2-10-2	10	AGSSTGRTTY	BBBAALABBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AAAPYGanWYRDEYAY
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	46.2	H1	13	H1-13-1	21	AASGRTFSMDPMA	BBBLBBAAABBBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	CDRLenMismatch	-1.0	H2	10	H2-10-2	8	AGSSTGRTTY	BBBAALABBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	50.0	H3	16	H3-16-*	-1	AAAPYGanWYRDEYAY
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	94.5	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB
E	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	38.5	H1	13	H1-13-*	-1	AASERTFSRYPVA	BBABAAAAABBBB
E	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	60.0	H2	10	H2-10-2	10	VISSTGTSTY	BBBAALABBB
E	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	50.0	H3	17	H3-17-*	-1	AVNSQRTrlqDPNEYDY
E	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	87.5	H4	8	H4-8-1	7	RDNAKVTV	BBAAALBB
F	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	38.5	H1	13	H1-13-*	-1	AASERTFSRYPVA	BBABAAAAABBBB
F	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	60.0	H2	10	H2-10-2	15	VISSTGTSTY	BBBAALABBB
F	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	50.0	H3	17	H3-17-*	-1	AVNSQRTrlqDPNEYDY
F	heavy	Lama.glama	La_IGHV1S1*01_VHH	86.3	La_IGHV1S1*01_VHH	87.5	H4	8	H4-8-1	10	RDNAKVTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022