PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4MAU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV3-2*02	94.5	Mo_IGHV3-2*02	92.9	H1	14	H1-14-1	7	TVTGFSITsDYAWN	BBBLBBAAABEBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV3-2*02	94.5	Mo_IGHV3-2*02	77.8	H2	9	H2-9-1	5	FISYSGDTS	BBBAALBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV3-2*02	94.5	Mo_IGHV3-2*02	50.0	H3	10	H3-10-*	-1	ASYDGYSFDY	BBBALABBAB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV3-2*02	94.5	Mo_IGHV3-2*02	100.0	H4	8	H4-8-1	7	RDTSKNQF	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	86.7	L1	15	L1-15-1	8	RASKSVStsgsSYMF	BBABBABBLLBBBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	100.0	L2	8	L2-8-1	6	YLASNLES	BLLABBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	85.7	L3	9	L3-9-cis7-1	11	QHSREIPYT	BBAABBbBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022