PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4M93

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Mus.musculus	Mo_IGHV2-2*02	97.3	Mo_IGHV2-2*02	92.3	H1	13	H1-13-1	24	TVSGFSLTTYGVH	BBBEBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV2-2*02	97.3	Mo_IGHV2-2*02	100.0	H2	9	H2-9-1	12	VIWSGGSTD	BBBAALBBB
B	heavy	Mus.musculus	Mo_IGHV2-2*02	97.3	Mo_IGHV2-2*02	100.0	H3	12	H3-12-*	-1	ARMRITTDWFAY	BBBLBABBBLBB
B	heavy	Mus.musculus	Mo_IGHV2-2*02	97.3	Mo_IGHV2-2*02	87.5	H4	8	H4-8-1	13	KDNSKSHV	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L1	16	L1-16-*	-1	RSSQYIvhrngNTYLE	BBABBBBBBLLBBBBB
C	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	5	YKVSNRFS	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	13	FQGSHVPYT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV2-2*02	97.3	Mo_IGHV2-2*02	92.3	H1	13	H1-13-1	13	TVSGFSLTTYGVH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-2*02	97.3	Mo_IGHV2-2*02	100.0	H2	9	H2-9-1	11	VIWSGGSTD	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV2-2*02	97.3	Mo_IGHV2-2*02	100.0	H3	12	H3-12-*	-1	ARMRITTDWFAY	BBBLBABABLBB
H	heavy	Mus.musculus	Mo_IGHV2-2*02	97.3	Mo_IGHV2-2*02	87.5	H4	8	H4-8-1	8	KDNSKSHV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L1	16	L1-16-*	-1	RSSQYIvhrngNTYLE	BBABBBBBBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	5	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	14	FQGSHVPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022