PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4M7L

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-9*01	91.8	Mo_IGHV1-9*01	76.9	H1	13	H1-13-1	14	KASGYTFITYWIE	BBBLBBAAABBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-9*01	91.8	Mo_IGHV1-9*01	90.0	H2	10	H2-10-3	16	DILPGSGSTN	BBBBLALBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-9*01	91.8	Mo_IGHV1-9*01	100.0	H3	13	H3-13-*	-1	ARSGYYGNSGFAY	BBBBAAEAAEBAB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-9*01	91.8	Mo_IGHV1-9*01	87.5	H4	8	H4-8-1	25	ADSSSNTA	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	94.1	L1	17	L1-17-1	19	KSSQSLlssgnqKNYLT	BBABBABBAAALBBBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L2	8	L2-8-1	9	YWASTRES	BLLABBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	85.7	L3	9	L3-9-cis7-1	20	QNDYTYPLT	BBAABBbBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	22	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022