PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4M5Z

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	86.3	Hu_IGHV4-38-2*01	92.9	H1	14	H1-14-2	23	AVSGYSISsNYYWG	BBBLBBABBBBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	86.3	Hu_IGHV4-38-2*01	100.0	H2	9	H2-9-1	11	SIYHSGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	86.3	Hu_IGHV4-38-2*01	100.0	H3	17	H3-17-*	-1	ARHVRSgypDTAYYFDK
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	86.3	Hu_IGHV4-38-2*01	100.0	H4	8	H4-8-1	12	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	94.0	Hu_IGLV3-21*03	72.7	L1	11	L1-11-3	5	GGNNIGTKVLH	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	94.0	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	9	YDDSDRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	94.0	Hu_IGLV3-21*03	66.7	L3	11	L3-11-1	12	QVWDISTDQAV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	94.0	Hu_IGLV3-21*03	100.0	L4	6	L4-6-*	-1	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022