PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4M1G

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-6-5*01	100.0	Mo_IGHV2-6-5*01	100.0	H1	13	H1-13-1	11	TVSGFSLTDYGVS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-6-5*01	100.0	Mo_IGHV2-6-5*01	77.8	H2	9	H2-9-1	11	VTWGGGTTY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV2-6-5*01	100.0	Mo_IGHV2-6-5*01	100.0	H3	12	H3-12-*	-1	AKHKASYNGLDY	BBBBABLLBBAB
H	heavy	Mus.musculus	Mo_IGHV2-6-5*01	100.0	Mo_IGHV2-6-5*01	100.0	H4	8	H4-8-1	6	KDNSKSQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-91*01	98.5	Mo_IGKV4-91*01	100.0	L1	12	L1-12-1	6	SASSSISsNYLH	BBABBBBAAABB
L	kappa	Mus.musculus	Mo_IGKV4-91*01	98.5	Mo_IGKV4-91*01	100.0	L2	8	L2-8-1	9	YRTSNLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV4-91*01	98.5	Mo_IGKV4-91*01	87.5	L3	9	L3-9-cis7-1	5	QQGSSIPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-91*01	98.5	Mo_IGKV4-91*01	100.0	L4	6	L4-6-1	9	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022