PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4LU5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	92.3	H1	13	H1-13-1	10	ATSGFTFSDYYIY	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	80.0	H2	10	H2-10-4	12	YISNGGYKTY	BBBBLLABBB
H	heavy	Mus.musculus	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	100.0	H3	6	H3-6-1	22	ARGMDY	BBEAAB
H	heavy	Mus.musculus	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	87.5	H4	8	H4-8-1	12	RDNAKNIL	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	92.3	H1	13	H1-13-1	11	ATSGFTFSDYYIY	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	80.0	H2	10	H2-10-4	10	YISNGGYKTY	BBBBLLABBB
I	heavy	Mus.musculus	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	100.0	H3	6	H3-6-1	21	ARGMDY	BBEAAB
I	heavy	Mus.musculus	Mo_IGHV5-12*02	95.9	Mo_IGHV5-12*02	87.5	H4	8	H4-8-1	13	RDNAKNIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	98.6	Mo_IGKV1-133*01	100.0	L1	16	L1-16-1	8	KSSQSLlysngKTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	98.6	Mo_IGKV1-133*01	100.0	L2	8	L2-8-1	8	YLVSKLDS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	98.6	Mo_IGKV1-133*01	100.0	L3	9	L3-9-cis7-1	15	VQGTHFPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	98.6	Mo_IGKV1-133*01	100.0	L4	6	L4-6-3	27	GSGTDF	EAAABB
M	kappa	Mus.musculus	Mo_IGKV1-133*01	98.6	Mo_IGKV1-133*01	100.0	L1	16	L1-16-1	9	KSSQSLlysngKTYLN	BBABBABBAALBBBBB
M	kappa	Mus.musculus	Mo_IGKV1-133*01	98.6	Mo_IGKV1-133*01	100.0	L2	8	L2-8-1	8	YLVSKLDS	BLEABBBB
M	kappa	Mus.musculus	Mo_IGKV1-133*01	98.6	Mo_IGKV1-133*01	100.0	L3	9	L3-9-cis7-1	13	VQGTHFPYT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV1-133*01	98.6	Mo_IGKV1-133*01	100.0	L4	6	L4-6-3	28	GSGTDF	EAAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022