PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4LRI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	93.8	L1	16	L1-16-1	6	RSSQSLlhtngYNYLD	BBABBABBAALBBBBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	87.5	L2	8	L2-8-1	4	YLASNRAS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	85.7	L3	9	L3-9-cis7-1	6	MQALQIPRT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	93.8	L1	16	L1-16-1	5	RSSQSLlhtngYNYLD	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	87.5	L2	8	L2-8-1	3	YLASNRAS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	85.7	L3	9	L3-9-cis7-1	6	MQALQIPRT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	95.7	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.0	Hu_IGHV3-21*01	76.9	H1	13	H1-13-1	14	AASGFTFSPYSVF	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.0	Hu_IGHV3-21*01	60.0	H2	10	H2-10-2	11	SINSDSTYKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.0	Hu_IGHV3-21*01	100.0	H3	23	H3-23-*	-1	ARDRSYYafssgslsdYYYGLDV
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.0	Hu_IGHV3-21*01	75.0	H4	8	H4-8-1	9	RDNAENSI	BBAAALBB
P	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.0	Hu_IGHV3-21*01	76.9	H1	13	H1-13-1	14	AASGFTFSPYSVF	BBBLBBAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.0	Hu_IGHV3-21*01	60.0	H2	10	H2-10-2	10	SINSDSTYKY	BBBAALABBB
P	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.0	Hu_IGHV3-21*01	100.0	H3	23	H3-23-*	-1	ARDRSYYafssgslsdYYYGLDV
P	heavy	Homo.sapiens	Hu_IGHV3-21*01	93.0	Hu_IGHV3-21*01	75.0	H4	8	H4-8-1	8	RDNAENSI	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022