PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4LKC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-13*02	100.0	Hu_IGKV1-13*02	100.0	L1	11	L1-11-1	5	RASQGISSALA	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-13*02	100.0	Hu_IGKV1-13*02	100.0	L2	8	L2-8-1	6	YDASSLES	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-13*02	100.0	Hu_IGKV1-13*02	85.7	L3	9	L3-9-2	9	QQFNSYLIT	BBAABABBB
A	kappa	Homo.sapiens	Hu_IGKV1-13*02	100.0	Hu_IGKV1-13*02	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYDMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	100.0	H2	9	H2-9-1	7	AIGTAGDTY	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	50.0	H3	22	H3-22-*	-1	VREGTYyhdsgsdnYYSYGMDV
B	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	100.0	H4	8	H4-8-1	7	RENAKNSL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022