PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4LHQ

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	87.5	Al_IGHV3-3*01_VHH	61.5	H1	13	H1-13-*	-1	SASGGSFSRNAMG	BBBEEABLABBBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	87.5	Al_IGHV3-3*01_VHH	70.0	H2	10	H2-10-*	-1	AINWSASSTY	BBBAAbABBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	87.5	Al_IGHV3-3*01_VHH	50.0	H3	22	H3-22-*	-1	AGSSVYAempyadsvKATSYNY
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	87.5	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	87.5	Al_IGHV3-3*01_VHH	61.5	H1	13	H1-13-*	-1	SASGGSFSRNAMG	BBBEEABLABBBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	87.5	Al_IGHV3-3*01_VHH	70.0	H2	10	H2-10-*	-1	AINWSASSTY	BBBAAbABBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	87.5	Al_IGHV3-3*01_VHH	50.0	H3	22	H3-22-*	-1	AGSSVYAempyadsvKATSYNY
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	87.5	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022