PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4LGP

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	82.2	Al_IGHV3S65*01_VHH	69.2	H1	13	H1-13-*	-1	AGSGGTLEHYAIG	BBAAEBAAABBBB
B	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	82.2	Al_IGHV3S65*01_VHH	40.0	H2	10	H2-10-*	-1	CNRGEYGSTV	BBBEeEBBBB
B	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	82.2	Al_IGHV3S65*01_VHH	0.0	H3	10	H3-10-*	-1	VSGCYSWRGP	BBEBLBBBEB
B	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	82.2	Al_IGHV3S65*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBBLALBB
D	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	82.2	Al_IGHV3S65*01_VHH	69.2	H1	13	H1-13-*	-1	AGSGGTLEHYAIG	BBAAEBAAABBBB
D	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	82.2	Al_IGHV3S65*01_VHH	40.0	H2	10	H2-10-*	-1	CNRGEYGSTV	BBAEAABBBB
D	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	82.2	Al_IGHV3S65*01_VHH	0.0	H3	10	H3-10-*	-1	VSGCYSWRGP	BBEBLBBAEb
D	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	82.2	Al_IGHV3S65*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022