PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4LF3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	100.0	L1	11	L1-11-1	10	RASQGIRNDLG	BBABBAEABBB
A	kappa	Mus.musculus	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	87.5	L2	8	L2-8-1	10	YAASSLES	BLEABBBB
A	kappa	Mus.musculus	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	85.7	L3	9	L3-9-cis7-1	7	LQHNSNPLT	BBAABBbBB
A	kappa	Mus.musculus	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB
B	heavy	Mus.musculus	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	8	AASGFTFSSYGMH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	80.0	H2	10	H2-10-*	-1	VMWYDGSNKD	BBBAAbABBB
B	heavy	Mus.musculus	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H3	21	H3-21-*	-1	AREKDhydiltgYNYYYGLDV
B	heavy	Mus.musculus	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
D	kappa	Mus.musculus	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	100.0	L1	11	L1-11-1	13	RASQGIRNDLG	BBABBAEABBB
D	kappa	Mus.musculus	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	87.5	L2	8	L2-8-1	8	YAASSLES	BLEABBBB
D	kappa	Mus.musculus	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	85.7	L3	9	L3-9-cis7-1	15	LQHNSNPLT	BBAABBbBB
D	kappa	Mus.musculus	Hu_IGKV1-17*01	97.1	Hu_IGKV1-17*01	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB
E	heavy	Mus.musculus	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	10	AASGFTFSSYGMH	BBBLBBAAABBBB
E	heavy	Mus.musculus	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	80.0	H2	10	H2-10-*	-1	VMWYDGSNKD	BBBAAbAABB
E	heavy	Mus.musculus	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H3	21	H3-21-*	-1	AREKDhydiltgYNYYYGLDV
E	heavy	Mus.musculus	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022