PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4KV5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	76.9	H1	13	H1-13-*	-1	KASGYTFSSNVIS	BBBEBEEAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	70.0	H2	10	H2-10-1	19	GVIPIVDIAN	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	50.0	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BBBALBABBBBAB
E	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	10	ADESTSTT	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSLgSSYLA	BBABBAEAAABB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	7	YGASSRAP	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	11	QQYADSPIT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	76.9	H1	13	H1-13-*	-1	KASGYTFSSNVIS	BBBEBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	70.0	H2	10	H2-10-1	19	GVIPIVDIAN	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	50.0	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BBBALBABBBBAB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	10	ADESTSTT	BBAAALBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSLgSSYLA	BBABBAEAAABB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	6	YGASSRAP	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	10	QQYADSPIT	BBAABBbBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	76.9	H1	13	H1-13-*	-1	KASGYTFSSNVIS	BBBEBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	70.0	H2	10	H2-10-1	20	GVIPIVDIAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	50.0	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BBBALBABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	9	ADESTSTT	BBAAALBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSLgSSYLA	BBABBAEAAABB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	6	YGASSRAP	BLLABBBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	10	QQYADSPIT	BBAABBbBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
J	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	76.9	H1	13	H1-13-*	-1	KASGYTFSSNVIS	BBBEBEEAABBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	70.0	H2	10	H2-10-1	18	GVIPIVDIAN	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	50.0	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BBBALBABBBBAB
J	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	10	ADESTSTT	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSLgSSYLA	BBABBAEAAABB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	7	YGASSRAP	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	10	QQYADSPIT	BBAABBbBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022