PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4KTD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	91.8	Ma_IGHV4-2*01	84.6	H1	13	H1-13-1	15	AVSGGSISTNDWS	BBBLBBAAABBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	91.8	Ma_IGHV4-2*01	70.0	H2	10	H2-10-1	10	GISGSSGDTD	BBBAAALBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	91.8	Ma_IGHV4-2*01	50.0	H3	18	H3-18-*	-1	VREGIVlvnlAVKNWFDV
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	91.8	Ma_IGHV4-2*01	100.0	H4	8	H4-8-1	12	TDTSKNQF	BBAAALBB
L	lambda	Macaca.mulatta	Ma_IGLV5S3*01	94.3	Ma_IGLV5S3*01	71.4	L1	14	L1-14-*	-1	TLSSGfTVGRYSIF	BBBAABBAAABBBB
L	lambda	Macaca.mulatta	Ma_IGLV5S3*01	94.3	Ma_IGLV5S3*01	58.3	L2	12	L2-12-*	-1	YyfsdSSQHQGS	BBABAABBBBBB
L	lambda	Macaca.mulatta	Ma_IGLV5S3*01	94.3	Ma_IGLV5S3*01	50.0	L3	9	L3-9-1	8	AIWHSGAWV	BBBBLLBBB
L	lambda	Macaca.mulatta	Ma_IGLV5S3*01	94.3	Ma_IGLV5S3*01	100.0	L4	8	L4-8-1	9	KdaSANAG	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022