PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4KQ4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	100.0	H1	13	H1-13-1	14	KGSGYTFTDYAMH	BBBLBBAAABBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	80.0	H2	10	H2-10-1	15	VISTYSGDAR	BBBAAALBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	100.0	H3	10	H3-10-*	-1	AREVRRSMDY	BBBBLLBBAB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-25*01	100.0	Mo_IGKV6-25*01	100.0	L1	11	L1-11-2	13	KASQDVSTAVA	BBABBALLABB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-25*01	100.0	Mo_IGKV6-25*01	100.0	L2	8	L2-8-1	11	YWASTRHT	BLLABBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-25*01	100.0	Mo_IGKV6-25*01	100.0	L3	9	L3-9-cis7-1	9	QQHYSTPYT	BBAABBbBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-25*01	100.0	Mo_IGKV6-25*01	100.0	L4	6	L4-6-1	18	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022