PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4KPH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	100.0	H1	13	H1-13-*	-1	SVTGDSITSGYWN	BBBEBBAABEBBB
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	66.7	H2	9	H2-9-1	11	YINYSGNTF	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	50.0	H3	7	H3-7-*	-1	ATYRFNY	BBBLLAB
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	100.0	H4	8	H4-8-1	9	RDTSKNQY	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	100.0	H1	13	H1-13-*	-1	SVTGDSITSGYWN	BBBEBBAABEBBB
I	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	66.7	H2	9	H2-9-1	11	YINYSGNTF	BBBAALBBB
I	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	50.0	H3	7	H3-7-*	-1	ATYRFNY	BBBLLAB
I	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	100.0	H4	8	H4-8-1	9	RDTSKNQY	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-80*01	100.0	Mo_IGKV4-80*01	90.0	L1	10	L1-10-1	9	SASSSVNYMH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-80*01	100.0	Mo_IGKV4-80*01	87.5	L2	8	L2-8-1	8	YTTSNLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV4-80*01	100.0	Mo_IGKV4-80*01	100.0	L3	8	L3-8-*	-1	HQWSSYPT	BBBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-80*01	100.0	Mo_IGKV4-80*01	100.0	L4	6	L4-6-1	9	GSGTFY	EBEABB
M	kappa	Mus.musculus	Mo_IGKV4-80*01	100.0	Mo_IGKV4-80*01	90.0	L1	10	L1-10-1	9	SASSSVNYMH	BBABBBABBB
M	kappa	Mus.musculus	Mo_IGKV4-80*01	100.0	Mo_IGKV4-80*01	87.5	L2	8	L2-8-1	8	YTTSNLAS	BLEABBBB
M	kappa	Mus.musculus	Mo_IGKV4-80*01	100.0	Mo_IGKV4-80*01	100.0	L3	8	L3-8-*	-1	HQWSSYPT	BBBBABBB
M	kappa	Mus.musculus	Mo_IGKV4-80*01	100.0	Mo_IGKV4-80*01	100.0	L4	6	L4-6-1	9	GSGTFY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022