PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4K3J

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-66*01	86.3	Mo_IGHV1-52*01	84.6	H1	13	H1-13-1	10	AASGYTFTSYWLH	BBBLBBAAABBBB
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-66*01	86.3	Mo_IGHV1-52*01	60.0	H2	10	H2-10-1	11	MIDPSNSDTR	BBBAAALBBB
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-66*01	86.3	Hu_IGHV3-66*01	50.0	H3	12	H3-12-*	-1	ATYRSYVTPLDY	BBBABAABBBAB
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-66*01	86.3	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	5	ADTSKNTA	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV8-30*01	88.2	L1	17	L1-17-1	6	KSSQSLlytssqKNYLA	BBABBABBAAALBBBBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	57.1	L3	9	L3-9-cis7-1	9	QQYYAYPWT	BBAABBbBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022