PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4K3E

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Bos.taurus	Bo_IGHV1-7*02	97.3	Bo_IGHV1-7*02	100.0	H1	13	H1-13-*	-1	TASGFSlsdKAVG
H	heavy	Bos.taurus	Bo_IGHV1-7*02	97.3	Bo_IGHV1-7*02	88.9	H2	9	H2-9-1	9	SIDTGGSTG	BBBAALBBB
H	heavy	Bos.taurus	Bo_IGHV1-7*02	97.3	Bo_IGHV1-7*02	100.0	H3	58	H3-58-*	-1	TTVHQETrktcsdgyiavdscgrgqsdgcvndcnscyygwrncrrqpaihsYEFHVDA
H	heavy	Bos.taurus	Bo_IGHV1-7*02	97.3	Bo_IGHV1-7*02	100.0	H4	8	H4-8-1	10	KDNSKSQV	BBAAALBB
I	heavy	Bos.taurus	Bo_IGHV1-7*02	97.3	Bo_IGHV1-7*02	100.0	H1	13	H1-13-1	14	TASGFSLSDKAVG	BBBLBBAAABBBB
I	heavy	Bos.taurus	Bo_IGHV1-7*02	97.3	Bo_IGHV1-7*02	88.9	H2	9	H2-9-1	9	SIDTGGSTG	BBBAALBBB
I	heavy	Bos.taurus	Bo_IGHV1-7*02	97.3	Bo_IGHV1-7*02	100.0	H3	58	H3-58-*	-1	TTVHQETrktcsdgyiavdscgrgqsdgcvndcnscyygwrncrrqpaihsYEFHVDA
I	heavy	Bos.taurus	Bo_IGHV1-7*02	97.3	Bo_IGHV1-7*02	100.0	H4	8	H4-8-1	10	KDNSKSQV	BBAAALBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	9	YGDTSRAS	BLEABBBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
L	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	12	RSGNTA	BBEABB
M	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAAAAAALBBB
M	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L2	8	L2-8-1	9	YGDTSRAS	BLEABBBB
M	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBBBLBAABBB
M	lambda	Bos.taurus	Bo_IGLV1-47*01	98.5	Bo_IGLV1-47*01	100.0	L4	6	L4-6-2	12	RSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022