PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4K2U

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV14-3*02	100.0	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	8	TASGFNIKDNYMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	100.0	Mo_IGHV14-3*02	100.0	H2	10	H2-10-1	9	RIDPANGNTK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	100.0	Mo_IGHV14-3*02	100.0	H3	14	H3-14-*	-1	ARHYDGYFLYYFEY	BBBBBEAAALBBAB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	100.0	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	6	ADTSSNTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV14-3*02	100.0	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	7	TASGFNIKDNYMH	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV14-3*02	100.0	Mo_IGHV14-3*02	100.0	H2	10	H2-10-1	9	RIDPANGNTK	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV14-3*02	100.0	Mo_IGHV14-3*02	100.0	H3	14	H3-14-*	-1	ARHYDGYFLYYFEY	BBBBBEAAALBBAB
I	heavy	Mus.musculus	Mo_IGHV14-3*02	100.0	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	8	ADTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	90.9	L1	11	L1-11-2	7	RAGQDISNYLN	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	100.0	L2	8	L2-8-1	6	YYTSRLHS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	85.7	L3	9	L3-9-cis7-1	11	QQGSTFPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	9	GSGTDY	EBEABB
M	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	90.9	L1	11	L1-11-2	6	RAGQDISNYLN	BBABBALLBBB
M	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	100.0	L2	8	L2-8-1	5	YYTSRLHS	BLEABBBB
M	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	85.7	L3	9	L3-9-cis7-1	9	QQGSTFPWT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	7	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022