PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4JPV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	64.9	Hu_IGHV1-2*07	46.2	H1	13	H1-13-*	-1	EASGYNIRDYFIH	BBABBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	64.9	Hu_IGHV1-2*07	60.0	H2	10	H2-10-1	9	WINPKTGQPN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	64.9	Hu_IGHV1-2*07	100.0	H3	12	H3-12-*	-1	ARQRSDYWDFDV	BBBABAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	64.9	Hu_IGHV1-2*07	0.0	H4	12	H4-12-*	-1	RHASwdfdTYSF
L	kappa	Homo.sapiens	Hu_IGKV1-17*02	81.2	None	0.0	L1	7	L1-7-*	-1	QANGYLN
L	kappa	Homo.sapiens	Hu_IGKV1-17*02	81.2	None	37.5	L2	8	L2-8-1	13	YDGSKLER	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-17*02	81.2	Hu_IGKV1-17*02	0.0	L3	5	L3-5-1	7	QVYEF	BBEAB
L	kappa	Homo.sapiens	Hu_IGKV1-17*02	81.2	Hu_IGKV1-17*02	33.3	L4	6	L4-6-*	-1	RWGQEY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022