PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4JM4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-4*07	76.7	None	-1.0	H1	20	H1-20-*	-1	TVSGDSIrggewgdKDYHWG
H	heavy	Homo.sapiens	Hu_IGHV4-4*07	76.7	None	-1.0	H2	9	H2-9-1	8	SIHWRGTTH	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-4*07	76.7	Hu_IGHV4-4*07	100.0	H3	20	H3-20-*	-1	ARHRHHDVfmlvpiAGWFDV
H	heavy	Homo.sapiens	Hu_IGHV4-4*07	76.7	Hu_IGHV4-4*07	62.5	H4	8	H4-8-1	11	IDTSRNWF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-15*03	79.7	Hu_IGKV3D-15*03	63.6	L1	11	L1-11-1	4	RASQNINKNLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3D-15*03	79.7	None	0.0	L2	8	L2-8-*	-1	FETYSKIA	BLLABBBA
L	kappa	Homo.sapiens	Hu_IGKV3D-15*03	79.7	Hu_IGKV3D-15*03	71.4	L3	9	L3-9-cis7-1	7	QQYEEWPRT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3D-15*03	79.7	Hu_IGKV3D-15*03	100.0	L4	6	L4-6-1	7	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022