PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4JDV

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	7	KASGYTFTGYYMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	9	WINPNSGGTN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H3	18	H3-18-*	-1	ARGKYCtardYYNWDFQH
A	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	10	RDTSISTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L1	11	L1-11-*	-1	RASQSVSSYLA	BBABBABABBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	6	YDASNRAT	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	0.0	L3	5	L3-5-1	11	QQYEF	BBEAB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	9	KASGYTFTGYYMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	10	WINPNSGGTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H3	18	H3-18-*	-1	ARGKYCtardYYNWDFQH
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	9	RDTSISTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L1	11	L1-11-*	-1	RASQSVSSYLA	BBBLBABABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	6	YDASNRAT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	0.0	L3	5	L3-5-1	10	QQYEF	BBEAB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L4	6	L4-6-2	11	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022