PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4J4P

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	93.3	H1	15	H1-15-*	-1	GISGDSVSSnsAAWN	BBBLBBAABBLBBBB
C	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H2	11	H2-11-*	-1	RTYYRsKWYND	BBBBAABBBBB
C	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H3	17	H3-17-*	-1	ARDGEIsydYYYYGMDV
C	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	87.5	H4	8	H4-8-1	20	PDTSRNQF	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV1-36*01	91.2	Hu_IGLV1-36*01	92.3	L1	13	L1-13-1	13	SGSSSNIGNNGVN	BBBAAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-36*01	91.2	Hu_IGLV1-36*01	100.0	L2	8	L2-8-1	17	YYDDLLPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-36*01	91.2	Hu_IGLV1-36*01	77.8	L3	11	L3-11-1	13	EAWDDSLDGVV	BBBBAAALBBB
D	lambda	Homo.sapiens	Hu_IGLV1-36*01	91.2	Hu_IGLV1-36*01	100.0	L4	6	L4-6-2	15	KSGTSA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	93.3	H1	15	H1-15-*	-1	GISGDSVSSnsAAWN	BBBLBBAABBLBBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H2	11	H2-11-*	-1	RTYYRsKWYND	BBBBBABBBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H3	17	H3-17-*	-1	ARDGEIsydYYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	87.5	H4	8	H4-8-1	22	PDTSRNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	91.2	Hu_IGLV1-36*01	92.3	L1	13	L1-13-1	11	SGSSSNIGNNGVN	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	91.2	Hu_IGLV1-36*01	100.0	L2	8	L2-8-4	9	YYDDLLPS	BEAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	91.2	Hu_IGLV1-36*01	77.8	L3	11	L3-11-1	12	EAWDDSLDGVV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	91.2	Hu_IGLV1-36*01	100.0	L4	6	L4-6-2	13	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022