PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4I18

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Hu_IGHV3-66*01	93.2	Mo_IGHV5-12-1*01	69.2	H1	13	H1-13-1	18	AASGFNFSSSSMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Hu_IGHV3-66*01	93.2	Mo_IGHV5-12-1*01	60.0	H2	10	H2-10-1	11	YISPYYGSTS	BBBAAALBBB
A	heavy	Mus.musculus	Hu_IGHV3-66*01	93.2	Hu_IGHV3-66*01	100.0	H3	18	H3-18-*	-1	ARSYGYVywnaYSSGMDY
A	heavy	Mus.musculus	Hu_IGHV3-66*01	93.2	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	8	ADTSKNTA	BBAAALBB
B	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Mo_IGKV6-17*01	72.7	L1	11	L1-11-1	12	RASQSVSSAVA	BBABBAEABBB
B	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	9	YSASSLYS	BLLABBBB
B	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	57.1	L3	11	L3-11-*	-1	QQYYSyyYPFT	BBAABAABBLB
B	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	9	RSGTDF	BBEABB
H	heavy	Mus.musculus	Hu_IGHV3-66*01	93.2	Mo_IGHV5-12-1*01	69.2	H1	13	H1-13-1	16	AASGFNFSSSSMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV3-66*01	93.2	Mo_IGHV5-12-1*01	60.0	H2	10	H2-10-1	11	YISPYYGSTS	BBBAAALBBB
H	heavy	Mus.musculus	Hu_IGHV3-66*01	93.2	Hu_IGHV3-66*01	100.0	H3	18	H3-18-*	-1	ARSYGYVywnaYSSGMDY
H	heavy	Mus.musculus	Hu_IGHV3-66*01	93.2	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	8	ADTSKNTA	BBAAALBB
L	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Mo_IGKV6-17*01	72.7	L1	11	L1-11-1	12	RASQSVSSAVA	BBABBAEABBB
L	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	7	YSASSLYS	BLLABBBB
L	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	57.1	L3	11	L3-11-*	-1	QQYYSyyYPFT	BBAABAABBLB
L	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	9	RSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022