PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4HXB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV9-3*02	93.2	Mo_IGHV9-3*02	100.0	H1	13	H1-13-1	12	KASGYTFTNYGMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-3*02	93.2	Mo_IGHV9-3*02	90.0	H2	10	H2-10-1	13	WIKTNTGEPT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-3*02	93.2	Mo_IGHV9-3*02	100.0	H3	8	H3-8-*	-1	ARLRAVDY	BBEAAEAB
H	heavy	Mus.musculus	Mo_IGHV9-3*02	93.2	Mo_IGHV9-3*02	75.0	H4	8	H4-8-*	-1	LEASANTA	BBAlLLBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	93.8	L1	16	L1-16-1	12	RSSQTIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	9	YKVSNRFP	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	71.4	L3	9	L3-9-cis7-1	8	FQASHDPPT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022