PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4HS6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	CDRLenMismatch	-1.0	L1	15	L1-15-1	6	RASESVDgygySFLH	BBABBABBLLBBBBB
A	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	62.5	L2	8	L2-8-1	6	YLASNLNS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	57.1	L3	9	L3-9-cis7-1	17	QQNNVDPWT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	Hu_IGHV4-59*11	69.2	H1	13	H1-13-*	-1	TVSGDSITSGYWN	BBBLBBAABEBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	Hu_IGHV4-59*11	77.8	H2	9	H2-9-1	9	YISYSGSTY	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	Hu_IGHV4-59*11	50.0	H3	12	H3-12-1	11	ALITTSTYAMDY	BBBBAAALBBAB
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	Hu_IGHV4-59*11	75.0	H4	8	H4-8-1	10	RDTSKNQY	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	Hu_IGHV4-59*11	69.2	H1	13	H1-13-*	-1	TVSGDSITSGYWN	BBBEBBBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	Hu_IGHV4-59*11	77.8	H2	9	H2-9-1	8	YISYSGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	Hu_IGHV4-59*11	50.0	H3	12	H3-12-1	11	ALITTSTYAMDY	BBBBAAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	Hu_IGHV4-59*11	75.0	H4	8	H4-8-1	11	RDTSKNQY	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	CDRLenMismatch	-1.0	L1	15	L1-15-1	6	RASESVDgygySFLH	BBABBABBLLBBBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	62.5	L2	8	L2-8-1	6	YLASNLNS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	57.1	L3	9	L3-9-cis7-1	18	QQNNVDPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022