PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4HK0

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-2*04	100.0	Hu_IGHV1-2*04	100.0	H1	13	H1-13-1	10	KASGYTFTGYYMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*04	100.0	Hu_IGHV1-2*04	100.0	H2	10	H2-10-1	11	WINPNSGGTN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*04	100.0	Hu_IGHV1-2*04	100.0	H3	19	H3-19-*	-1	ARGgleprsvdyYYYGMDV
A	heavy	Homo.sapiens	Hu_IGHV1-2*04	100.0	Hu_IGHV1-2*04	100.0	H4	8	H4-8-1	12	RDTSISTA	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L1	11	L1-11-3	12	GGNNIGSKSVH	BBBLAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	9	YDDSDRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L3	11	L3-11-1	22	QVWDSSSDHVV	BBBBAAALBBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	13	NSGNTA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-2*04	100.0	Hu_IGHV1-2*04	100.0	H1	13	H1-13-1	10	KASGYTFTGYYMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-2*04	100.0	Hu_IGHV1-2*04	100.0	H2	10	H2-10-1	11	WINPNSGGTN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-2*04	100.0	Hu_IGHV1-2*04	100.0	H3	19	H3-19-*	-1	ARGgleprSVDYYYYGMDV
C	heavy	Homo.sapiens	Hu_IGHV1-2*04	100.0	Hu_IGHV1-2*04	100.0	H4	8	H4-8-1	11	RDTSISTA	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L1	11	L1-11-*	-1	GGNNIGSKSVH	BBBLAAAAEBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	9	YDDSDRPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L3	11	L3-11-1	21	QVWDSSSDHVV	BBBBAAALBBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	13	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022