PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4HJJ

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV2-70*17	93.2	Mo_IGHV8-12*01	80.0	H1	15	H1-15-*	-1	TFSGFSLSKSVMgvS	BBBLBBAAABABBBB
H	heavy	Homo.sapiens	Hu_IGHV2-70*17	93.2	Mo_IGHV8-12*01	88.9	H2	9	H2-9-*	-1	HIYWDDDKY	BBBBbLBBB
H	heavy	Homo.sapiens	Hu_IGHV2-70*17	93.2	Hu_IGHV2-70*17	66.7	H3	11	H3-11-1	16	ARRGIRSAMDY	BBBBAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV2-70*17	93.2	Hu_IGHV2-70*17	100.0	H4	8	H4-8-*	-1	KDTSKNQV	BBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV2-70*17	93.2	Hu_IGHV5-51*01	84.6	H1	13	H1-13-1	8	KGSGYTVTSYWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV2-70*17	93.2	Hu_IGHV5-51*01	80.0	H2	10	H2-10-1	12	FIYPGDSETR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV2-70*17	93.2	Hu_IGHV5-51*01	100.0	H3	14	H3-14-*	-1	ARVGSGWYPYTFDI	BBBBBEBLBLBBAB
H	heavy	Homo.sapiens	Hu_IGHV2-70*17	93.2	Hu_IGHV5-51*01	75.0	H4	8	H4-8-1	8	ADKSFNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Mo_IGKV6-32*01	100.0	L1	11	L1-11-1	5	KASQSVSNDVA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Mo_IGKV6-32*01	100.0	L2	8	L2-8-1	6	YYASNRYT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	57.1	L3	9	L3-9-cis7-1	10	QQDYNSPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV3-15*01	81.8	L1	11	L1-11-1	6	RASESISSNLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV3-15*01	87.5	L2	8	L2-8-1	12	YTASTRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV3-15*01	100.0	L3	10	L3-10-*	-1	QQYNNWPsIT	BBAABBaBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	6	GSGTEF	EBEABB

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