PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4HH9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	72.7	L1	11	L1-11-1	4	RASQSVGGYLT	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	6	YDASNRAT	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	85.7	L3	10	L3-10-cis78-1	8	QQRGNWpPIT	BBAABBbbBB
A	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-30*03	93.2	Hu_IGHV3-30*03	84.6	H1	13	H1-13-1	8	AASGFTFSNHGMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*03	93.2	Hu_IGHV3-30*03	60.0	H2	10	H2-10-2	8	VISYDGRHEH	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*03	93.2	Hu_IGHV3-30*03	100.0	H3	18	H3-18-*	-1	AREGLSRDNSGFtgliDY
B	heavy	Homo.sapiens	Hu_IGHV3-30*03	93.2	Hu_IGHV3-30*03	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	72.7	L1	11	L1-11-1	5	RASQSVGGYLT	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	7	YDASNRAT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	85.7	L3	10	L3-10-cis78-1	8	QQRGNWpPIT	BBAABBbbBB
C	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-30*03	93.2	Hu_IGHV3-30*03	84.6	H1	13	H1-13-1	8	AASGFTFSNHGMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*03	93.2	Hu_IGHV3-30*03	60.0	H2	10	H2-10-2	9	VISYDGRHEH	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*03	93.2	Hu_IGHV3-30*03	100.0	H3	18	H3-18-*	-1	AREGLSRDNSGFtgliDY
D	heavy	Homo.sapiens	Hu_IGHV3-30*03	93.2	Hu_IGHV3-30*03	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022