PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4FQQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L1	11	L1-11-3	9	GGNNIGSKSVH	BBBLAAABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	8	YDDSDRPS	BLEABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L3	12	L3-12-*	-1	QVWDSSSDHpWV
A	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	13	NSGNTA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H1	13	H1-13-4	17	TVSGGSISSYYWS	BBBLEBABLBBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H2	9	H2-9-1	15	YIYYSGSTN	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ARTQQgkriygvvsfgdYYYYYYMDV
B	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L1	11	L1-11-3	7	GGNNIGSKSVH	BBBLAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	9	YDDSDRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L3	12	L3-12-*	-1	QVWDSSSDHpWV
C	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	12	NSGNTA	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H1	13	H1-13-4	18	TVSGGSISSYYWS	BBBLEBABLBBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H2	9	H2-9-1	14	YIYYSGSTN	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ARTQQgkriygvvsfgdYYYYYYMDV
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H4	8	H4-8-1	10	VDTSKNQF	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L1	11	L1-11-3	6	GGNNIGSKSVH	BBBLAAABBBB
E	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	9	YDDSDRPS	BLLABBBB
E	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L3	12	L3-12-*	-1	QVWDSSSDHpWV
E	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H1	13	H1-13-4	14	TVSGGSISSYYWS	BBBLBBABLBBBB
F	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H2	9	H2-9-1	13	YIYYSGSTN	BBBAALBBB
F	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ARTQQgkriygvvsfgdYYYYYYMDV
F	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H4	8	H4-8-1	11	VDTSKNQF	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H1	13	H1-13-4	15	TVSGGSISSYYWS	BBBLBBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H2	9	H2-9-1	13	YIYYSGSTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ARTQQgkriygvvsfgdYYYYYYMDV
H	heavy	Homo.sapiens	Hu_IGHV4-59*03	100.0	Hu_IGHV4-59*03	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L1	11	L1-11-3	8	GGNNIGSKSVH	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	10	YDDSDRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L3	12	L3-12-*	-1	QVWDSSSDHpWV
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	100.0	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022