PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4F58

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	61.5	H1	13	H1-13-1	8	VASGFSFSDFGMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	30.0	H2	10	H2-10-*	-1	FVPFDRRINY	BBBABBABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	100.0	H3	18	H3-18-*	-1	AKHRSQWNfwprEGGLDH
H	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	75.0	H4	8	H4-8-1	9	RDDSKNTV	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	61.5	H1	13	H1-13-1	8	VASGFSFSDFGMN	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	30.0	H2	10	H2-10-*	-1	FVPFDRRINY	BBBABBBBBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	100.0	H3	18	H3-18-*	-1	AKHRSQWNfwprEGGLDH
I	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	75.0	H4	8	H4-8-1	11	RDDSKNTV	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	61.5	H1	13	H1-13-1	10	VASGFSFSDFGMN	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	30.0	H2	10	H2-10-*	-1	FVPFDRRINY	BBBABBBBBB
J	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	100.0	H3	18	H3-18-*	-1	AKHRSQWNfwprEGGLDH
J	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	75.0	H4	8	H4-8-1	6	RDDSKNTV	BBAAALBB
K	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	61.5	H1	13	H1-13-1	8	VASGFSFSDFGMN	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	30.0	H2	10	H2-10-*	-1	FVPFDRRINY	BBBABBABBB
K	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	100.0	H3	18	H3-18-*	-1	AKHRSQWNfwprEGGLDH
K	heavy	Homo.sapiens	Hu_IGHV3-30*02	87.7	Hu_IGHV3-30*02	75.0	H4	8	H4-8-1	6	RDDSKNTV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	78.6	L1	14	L1-14-2	9	TGTTSDVGTyNFVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	15	FDVTNRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	55.6	L3	10	L3-10-1	13	AAYTVASTLL	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	83.3	L4	6	L4-6-2	8	KFGNTA	BBEABB
M	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	78.6	L1	14	L1-14-2	9	TGTTSDVGTyNFVS	BBBAAAAAABABBB
M	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	11	FDVTNRPS	BLLABBBB
M	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	55.6	L3	10	L3-10-1	12	AAYTVASTLL	BBBBAALBBB
M	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	83.3	L4	6	L4-6-2	11	KFGNTA	BBEABB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	78.6	L1	14	L1-14-2	10	TGTTSDVGTyNFVS	BBBAAAAAABABBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	10	FDVTNRPS	BLLABBBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	55.6	L3	10	L3-10-1	13	AAYTVASTLL	BBBBAALBBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	83.3	L4	6	L4-6-2	7	KFGNTA	BBEABB
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	78.6	L1	14	L1-14-2	12	TGTTSDVGTyNFVS	BBBAAAAAABABBB
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	10	FDVTNRPS	BLLABBBB
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	55.6	L3	10	L3-10-1	14	AAYTVASTLL	BBBBAALBBB
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	83.3	L4	6	L4-6-2	8	KFGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022