PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4F3F

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	100.0	L1	10	L1-10-1	9	SASSSVSYMH	BBABBBABBB
A	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	100.0	L2	8	L2-8-1	9	YDTSKLAS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	62.5	L3	9	L3-9-cis7-1	20	QQWSKHPLT	BBBABBbBB
A	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	83.3	L4	6	L4-6-1	17	GSGNSY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYTMN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	50.0	H2	10	H2-10-1	11	LITPYNGASS	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H3	12	H3-12-*	-1	ARGGYDGRGFDY	BBBBBLLBEBAB
B	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	9	VDKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022