PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4F33

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	100.0	L1	10	L1-10-*	-1	SASSSVSYMH	BBABBBBLBB
A	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	100.0	L2	8	L2-8-1	4	YDTSKLAS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	62.5	L3	9	L3-9-cis7-1	7	QQWSKHPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	83.3	L4	6	L4-6-1	14	GSGNSY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	9	KASGYSFTGYTMN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	50.0	H2	10	H2-10-1	7	LITPYNGASS	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H3	12	H3-12-*	-1	ARGGYDGRGFDY	BBBBAALAEBAB
B	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	6	VDKSSSTA	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	100.0	L1	10	L1-10-*	-1	SASSSVSYMH	BBABBBBLBB
C	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	100.0	L2	8	L2-8-1	4	YDTSKLAS	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	62.5	L3	9	L3-9-cis7-1	7	QQWSKHPLT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	83.3	L4	6	L4-6-1	14	GSGNSY	EBEABB
D	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	9	KASGYSFTGYTMN	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	50.0	H2	10	H2-10-1	7	LITPYNGASS	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H3	12	H3-12-*	-1	ARGGYDGRGFDY	BBBBAALAEBAB
D	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	6	VDKSSSTA	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	100.0	L1	10	L1-10-*	-1	SASSSVSYMH	BBABBBBLBB
E	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	100.0	L2	8	L2-8-1	3	YDTSKLAS	BLLABBBB
E	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	62.5	L3	9	L3-9-cis7-1	7	QQWSKHPLT	BBAABBbBB
E	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	83.3	L4	6	L4-6-1	15	GSGNSY	EBEABB
F	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYTMN	BBBLBBAAABBBB
F	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	50.0	H2	10	H2-10-1	7	LITPYNGASS	BBBAAALBBB
F	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H3	12	H3-12-*	-1	ARGGYDGRGFDY	BBBBAALAEBAB
F	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB
G	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	100.0	L1	10	L1-10-*	-1	SASSSVSYMH	BBABBBBLBB
G	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	100.0	L2	8	L2-8-1	3	YDTSKLAS	BLLABBBB
G	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	62.5	L3	9	L3-9-cis7-1	7	QQWSKHPLT	BBAABBbBB
G	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	83.3	L4	6	L4-6-1	14	GSGNSY	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	9	KASGYSFTGYTMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	50.0	H2	10	H2-10-1	8	LITPYNGASS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H3	12	H3-12-*	-1	ARGGYDGRGFDY	BBBBAALAEBAB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	90.4	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022